Journal: Water
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- FishSeg: 3D Fish Tracking Using Mask R-CNN in Large Ethohydraulic FlumesItem type: Journal Article
WaterYang, Fan; Moldenhauer-Roth, Anita; Boes, Robert; et al. (2023)To study the fish behavioral response to up- and downstream fish passage structures, live-fish tests are conducted in large flumes in various laboratories around the world. The use of multiple fisheye cameras to cover the full width and length of a flume, low color contrast between fish and flume bottom and non-uniform illumination leading to fish shadows, air bubbles wrongly identified as fish as well as fish being partially hidden behind each other are the main challenges for video-based fish tracking. This study improves an existing open-source fish tracking code to better address these issues by using a modified Mask Regional-Convolutional Neural Network (Mask R-CNN) as a tracking method. The developed workflow, FishSeg, consists of four parts: (1) stereo camera calibration, (2) background subtraction, (3) multi-fish tracking using Mask R-CNN, and (4) 3D conversion to flume coordinates. The Mask R-CNN model was trained and validated with datasets manually annotated from background subtracted videos from the live-fish tests. Brown trout and European eel were selected as target fish species to evaluate the performance of FishSeg with different types of body shapes and sizes. Comparison with the previous method illustrates that the tracks generated by FishSeg are about three times more continuous with higher accuracy. Furthermore, the code runs more stable since fish shadows and air bubbles are not misidentified as fish. The trout and eel models produced from FishSeg have mean Average Precisions (mAPs) of 0.837 and 0.876, respectively. Comparisons of mAPs with other R-CNN-based models show the reliability of FishSeg with a small training dataset. FishSeg is a ready-to-use open-source code for tracking any fish species with similar body shapes as trout and eel, and further fish shapes can be added with moderate effort. The generated fish tracks allow researchers to analyze the fish behavior in detail, even in large experimental facilities. - Holocene Paleoenvironmental Evolution of a Semi-Enclosed Shallow Aegean Basin: A Combination of Seismic Stratigraphy and Sediment Core ProxiesItem type: Journal Article
WaterNoti, Alexandra; Lourens, Lucas J.; Geraga, Maria; et al. (2022)The island of Astypalea (Greece), known for its rich and pristine archeological sites, encompasses a semi-enclosed silled basin that has been very susceptible to global sea levels and regional climate changes due to its relatively modern shallow sill of 4.7 m water deep that connects the Vathy bay with the adjacent Aegean Sea. To identify the causal relationship between regional climate, sea-level trajectories, and environmental change and their potential impact on hominine habitats on the island, we investigated a high-resolution seismic profile together with sediment, stable isotope, geochemical, and biotic proxies retrieved from a marine sediment core (ASTC1). Our results show that the basin was once isolated, and a marine inundation occurred at around 7.3 ka BP, which is older than expected, based on global sea level reconstructions. The entire transition from isolation to full marine conditions was accomplished in three major phases: (1) non-marine isolated conditions between 9–7.3 ka BP, (2) semi-isolated hypersaline marsh and lagoonal conditions between 7.3 and 4.1 ka BP, and (3) semi-isolated shallow marine conditions of today (4.1 ka BP to present). High water alkalinity, elevated organic content, and heavier isotopic signals indicate relatively arid conditions in the region that favored Sr-rich carbonate precipitation within the 7.3–6 ka BP interval. On the other hand, freshwater biota, along with a high Corg/N ratio and lighter isotopic signal, showed wetter conditions, at least for the intervals 8–7.3 ka and 6–5.4 ka BP, in contrast to the aridification trend seen as 4.1 ka to present. Finally, the hominine habitat evolution at around 6 ka BP might be attributed to the wetter conditions and the freshwater source provided by the bay at that time. - Modeling Streambank and Artificial Gravel Deposit Erosion for Sediment ReplenishmentItem type: Journal Article
WaterVonwiller, Lukas; Vetsch, David F.; Boes, Robert (2018)Sediment replenishment by artificial gravel deposits is a measure to increase sediment supply in gravel-bed rivers. Thereby, streambank erosion is the dominant process for gravel entrainment. In this contribution, we quantitatively validate a numerical morphodynamic 2D model and the relevant model approaches to reproduce non-cohesive streambank erosion. Therefore, a calibration and a sensitivity analysis of the relevant model approaches and parameters are carried out based on a reference laboratory experiment on streambank erosion in a straight channel from the literature. The relevant model approaches identified to successfully reproduce lateral streambank erosion are the gravitational bank collapse, the lateral bed slope effect on the bed load transport direction and the local bed slope effect on the critical Shields stress. Based on these findings, the numerical model was compared against data from laboratory experiments on gravel deposit erosion. Thereby, the focus was on the influence of the hydraulic discharge, the grain size distribution of the sediment and the geometrical quantities of the gravel deposits, such as the width, height and length of the deposit. It is shown that the dynamics of the erosion process were well reproduced by the numerical model using non-uniform sediment. Furthermore, the erosion rates were in good agreement with the laboratory experiments, except for the initial phase of the experiments, where the erosion rates were highest and settling of the gravel deposit was observed in the laboratory experiments. Overall, the numerical model proved to be a suitable tool to predict the erosion process of artificial gravel deposits, and hence, can be recommended for the design of sediment replenishment measures. - How to Meter Agricultural Pumping at Numerous Small-Scale Wells?-An Indirect Monitoring Method Using Electric Energy as ProxyItem type: Journal Article
WaterWang, Lu; Kinzelbach, Wolfgang; Yao, Huaixian; et al. (2020)The large number of users and the small scale of wells greatly complicate monitoring of groundwater abstraction in areas of intensive pumping by numerous smallholders such as in the North China Plain. This paper presents a study in a typical county in the North China Plain. It discusses the application and challenges of an indirect, energy-based approach to groundwater abstraction monitoring. Intensive field experiments at individual wells were carried out to provide a basis for the conversion from electric energy consumption to groundwater abstraction and to explore the feasibility of direct and indirect abstraction monitoring methods in the study area. The results show that the main challenge of electricity-to-water conversion lies in the large spread of conversion factors between wells. The conversion error at an individual well is found to be less than 20%. The same accuracy is achieved on spatially aggregated levels by testing only a small number of wells. Trade-offs can be made to obtain groundwater abstraction estimates at the required accuracy and with reasonable efforts regarding data collection. The analysis shows that energy-based groundwater abstraction monitoring outperforms direct water metering with respect to cost and robustness. It provides satisfactory data accuracy and equitability in regions where irrigation wells are powered by electricity. - Wood Retention at Inclined Bar Screens: Effect of Wood Characteristics on Backwater Rise and Bedload TransportItem type: Journal Article
WaterSchalko, Isabella; Ruiz-Villanueva, Virginia; Maager, Fiona; et al. (2021)In forested mountain catchment areas, both bedload and large wood (LW) can be transported during ordinary flows. Retention structures such as sediment traps or racks are built to mitigate potential hazards downstream. Up to now, the design of these retention structures focuses on either LW or bedload. In addition, the majority of LW retention racks tend to retain both LW and bedload, while bedload transport continuity during ordinary flows is an important aspect to be considered in the design. Therefore, a series of flume experiments was conducted to study the effect of LW accumulations at an inclined bar screen with a bottom clearance on backwater rise and bedload transport. The main focus was put on testing different LW characteristics such as LW size, density, fine material, and shape (branches and rootwads), as well as a sequenced flood. The results demonstrated that a few logs (wood volume of ≈ 7 m3 prototype scale with a model scale factor of 30) are sufficient to reduce the bedload transport capacity to below 75% compared to the condition without LW. Fine material and smaller wood sizes further reduced bedload transport and increased backwater rise. In contrast, LW density and LW shape had a negligible effect. The test focusing on a sequenced flood highlighted the need for maintenance measures to avoid self-flushing of the bed material. The results of this study further indicate that an inclined bar screen may need to be adapted by considering LW characteristics in the design of the bottom clearance to enable bedload continuity during ordinary flows. - Predicting Macroinvertebrate Responses to Water Abstraction in Alpine StreamsItem type: Journal Article
WaterConsoli, Gabriele; Lepori, Fabio; Robinson, Christopher T.; et al. (2021)Exploitation of hydropower potential in alpine areas undermines the ecological integrity of rivers. Damming and water abstraction substantially alter the physical habitat template of rivers, with strong repercussions on aquatic communities and their resources. Tools are needed to predict and manage the consequences of these alterations on the structure and functioning of macroinvertebrate communities and resource availability in alpine streams. We developed habitat preference models for taxa, functional feeding guilds, and organic resources to quantify the effects of discharge alteration on macroinvertebrate communities in two alpine streams. Our physical habitat model related an indirect measure of bottom hydraulic forces (FST hemispheres) to the distribution of macroinvertebrate taxa and their resources. We observed that flow-dependent habitat availability for macroinvertebrate communities generally decreased with increasing water abstraction. We were able to relate these changes to near-bed hydraulic conditions. Our results suggest, however, the existence of upper discharge thresholds delimiting optimal habitat conditions for taxa. In contrast, we found weak effects of near-bed hydraulic conditions on resource distribution. Overall, our findings contribute towards predicting the impacts of water abstraction on macroinvertebrate communities in small alpine streams and the benefits of baseflow restoration. - Gaps in Water Quality Modeling of Hydrologic SystemsItem type: Review Article
WaterLucas, Lisa V.; Brown, Craig J.; Robertson, Dale M.; et al. (2025)This review assesses gaps in water quality modeling, emphasizing opportunities to improve next-generation models that are essential for managing water quality and are integral to meeting goals of scientific and management agencies. In particular, this paper identifies gaps in water quality modeling capabilities that, if addressed, could support assessments, projections, and evaluations of management alternatives to support ecosystem health and human beneficial use of water resources. It covers surface water and groundwater quality modeling, dealing with a broad suite of physical, biogeochemical, and anthropogenic drivers. Modeling capabilities for six constituents (or constituent categories) are explored: water temperature, salinity, nutrients, sediment, geogenic constituents, and contaminants of emerging concern. Each constituent was followed through the coupled atmospheric-hydrologic-human system, with prominent modeling gaps described for a diverse array of relevant inputs, processes, and human activities. Commonly identified modeling gaps primarily fall under three types: (1) model gaps, (2) data gaps, and (3) process understanding gaps. In addition to potential solutions for addressing specific individual modeling limitations, some broad approaches (e.g., enhanced data collection and compilation, machine learning, reduced-complexity modeling) are discussed as ways forward for tackling multiple gaps. This gap analysis establishes a framework of diverse approaches that may support improved process representation, scale, and accuracy of models for a wide range of water quality issues. - Global Meta-Analysis of Nitrate Leaching Vulnerability in Synthetic and Organic Fertilizers over the Past Four DecadesItem type: Journal Article
WaterHina, Naila Sumreen (2024)The significance of nitrogen in agricultural ecosystems cannot be overstated; however, it can pose a threat to the environment when it leaches into groundwater. This comprehensive meta-analysis sheds light on the complex relationship between organic and inorganic fertilizers and nitrogen leaching, encompassing 39 years of data. The results indicate that the impact of fertilizers is dependent on crop type, soil properties, and fertilization practices. Vegetables treated with synthetic fertilizers were found to have the highest levels of nitrogen leaching, while grasses exhibited the lowest. Soil texture was also determined to be a significant factor, with coarser soils leading to higher levels of leaching than medium or fine soils. The meta-analysis showed that organic sources resulted in an average of 16% higher losses of nitrate-N, but there was no significant difference between organic and synthetic N fertilizers in terms of leaching overall. These findings provide valuable insights for the responsible management of nitrogen and to further our understanding of the impact of fertilizers on nitrate pollution. - Scour features at wood bundlesItem type: Journal Article
WaterPagliara, Simone; Roy, Deep; Palermo, Michele (2021)Structures like blunt-nosed chevrons, log deflectors and double-winged log frames help in modifying the flow regime in the channel by concentrating the flow and increasing navigability. Moreover, they create scour pools in the downstream stilling basin, which can be used either as fish refuge or as an in-stream storage site for previously dredged material. In this respect, the use of wood debris in the channel in the form of wood bundles has gained attention for the ability of these structures to integrate into the surrounding fluvial habitat and to divert the flow partially towards the central part of the channel when placed in curves. Considering the absence of studies dealing with wood bundles as a restoration structure, the aim of this paper is to analyse the scour mechanism and equilibrium scour morphology of wood bundles in straight and curved channels. In doing so, a wide range of hydraulic conditions, structure positions and configurations were tested. Thereafter, dimensional analysis was carried out to derive useful empirical relationships to predict the maximum scour depth and length as well as the maximum dune height based on a novel, equivalent Froude number, which accounts for the effects of channel curvature and structure position. Moreover, the various resulting scour morphology types were classified, and conditions of their existence were determined depending on the abovementioned Froude number and other key hydraulic parameters. - Analytical Determination of Irrotational Flow Profiles in Open-Channel TransitionsItem type: Journal Article
WaterCastro-Orgaz, Oscar; Hager, Willi H. (2023)Transitional free surface flow profiles with a critical point occur with weak vorticity and viscosity effects and thus can be modeled with an irrotational flow approach. Important examples in hydraulic engineering include flow over low obstacles, transition structures in canals, and flow over high spillways. While solving Laplace’s equation is relatively simple, the determination of the unknown free surface and energy head of the flow is challenging. Both hydraulic quantities need to be iterated before solving the Laplace equation. Former models iterated the energy head on a trial-and-error basis, assuming that the linked free surface profile is smooth, i.e., free of waves. The iteration of the free surface for a given head is frequently accomplished using the Newton–Rapshon method, which is difficult for the challenging case of spillway flow, giving no solution in some cases. An alternative method of computing irrotational flow profiles in transitional flows involving a critical point is proposed in this work. The model contains three elements: mapping of Laplace’s equation to directly track the streamlines, determination of the critical point and unknown energy head using a critical flow condition for irrotational flows, and determination of the water surface position using an exact analytical solution. The proposed model is favorably compared with experimental data from different sources and CFD results, indicating a reasonable agreement.
Publications1 - 10 of 58