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dc.contributor.author
Seeleuthner, Yoann
dc.contributor.author
Mondy, Samuel
dc.contributor.author
Lombard, Vincent
dc.contributor.author
Carradec, Quentin
dc.contributor.author
Pelletier, Eric
dc.contributor.author
Wessner, Marc
dc.contributor.author
Leconte, Jade
dc.contributor.author
Mangot, Jean-Francois
dc.contributor.author
Poulain, Julie
dc.contributor.author
Labadie, Karine
dc.contributor.author
Logares, Ramiro
dc.contributor.author
Sunagawa, Shinichi
dc.contributor.author
de Berardinis, Veronique
dc.contributor.author
Salanoubat, Marcel
dc.contributor.author
Dimier, Céline
dc.contributor.author
Kandels-Lewis, Stefanie
dc.contributor.author
Picheral, Marc
dc.contributor.author
Searson, Sarah
dc.contributor.author
Tara Oceans, Coordinators
dc.contributor.author
Pesant, Stephane
dc.contributor.author
Poulton, Nicole
dc.contributor.author
Stepanauskas, Ramunas
dc.contributor.author
Bork, Peer
dc.contributor.author
Bowler, Chris
dc.contributor.author
Hingamp, Pascal
dc.contributor.author
Sullivan, Matthew B.
dc.contributor.author
Iudicone, Daniele
dc.contributor.author
Massana, Ramon
dc.contributor.author
Aury, Jean-Marc
dc.contributor.author
Henrissat, Bernard
dc.contributor.author
Karsenti, Eric
dc.contributor.author
Jaillon, Olivier
dc.contributor.author
Sieracki, Mike
dc.contributor.author
de Vargas, Colomban
dc.contributor.author
Wincker, Patrick
dc.date.accessioned
2018-02-15T10:08:15Z
dc.date.available
2018-02-02T03:06:33Z
dc.date.available
2018-02-15T10:08:15Z
dc.date.issued
2018-01-22
dc.identifier.other
10.1038/s41467-017-02235-3
en_US
dc.identifier.uri
http://hdl.handle.net/20.500.11850/238156
dc.identifier.doi
10.3929/ethz-b-000238156
dc.description.abstract
Single-celled eukaryotes (protists) are critical players in global biogeochemical cycling of nutrients and energy in the oceans. While their roles as primary producers and grazers are well appreciated, other aspects of their life histories remain obscure due to challenges in culturing and sequencing their natural diversity. Here, we exploit single-cell genomics and metagenomics data from the circumglobal Tara Oceans expedition to analyze the genome content and apparent oceanic distribution of seven prevalent lineages of uncultured heterotrophic stramenopiles. Based on the available data, each sequenced genome or genotype appears to have a specific oceanic distribution, principally correlated with water temperature and depth. The genome content provides hypotheses for specialization in terms of cell motility, food spectra, and trophic stages, including the potential impact on their lifestyles of horizontal gene transfer from prokaryotes. Our results support the idea that prominent heterotrophic marine protists perform diverse functions in ocean ecology.
en_US
dc.format
application/pdf
en_US
dc.language.iso
en
en_US
dc.publisher
Nature Publishing Group
en_US
dc.rights.uri
http://creativecommons.org/licenses/by/4.0/
dc.subject
Genomics
en_US
dc.subject
Marine biology
en_US
dc.subject
Microbial ecology
en_US
dc.subject
Water microbiology
en_US
dc.title
Single-cell genomics of multiple uncultured stramenopiles reveals underestimated functional diversity across oceans
en_US
dc.type
Journal Article
dc.rights.license
Creative Commons Attribution 4.0 International
ethz.journal.title
Nature Communications
ethz.journal.volume
9
en_US
ethz.pages.start
310
en_US
ethz.size
10 p.
en_US
ethz.version.deposit
publishedVersion
en_US
ethz.identifier.wos
ethz.identifier.scopus
ethz.publication.place
London
en_US
ethz.publication.status
published
en_US
ethz.leitzahl
::ETH Zürich::00002 - ETH Zürich
ethz.leitzahl
ETH Zürich::00002 - ETH Zürich::00012 - Lehre und Forschung::00007 - Departemente::02030 - Dep. Biologie / Dep. of Biology::02520 - Institut für Mikrobiologie / Institute of Microbiology::09583 - Sunagawa, Shinichi / Sunagawa, Shinichi
ethz.leitzahl.certified
ETH Zürich::00002 - ETH Zürich::00012 - Lehre und Forschung::00007 - Departemente::02030 - Dep. Biologie / Dep. of Biology::02520 - Institut für Mikrobiologie / Institute of Microbiology::09583 - Sunagawa, Shinichi / Sunagawa, Shinichi
ethz.date.deposited
2018-02-02T03:06:44Z
ethz.source
WOS
ethz.eth
yes
en_US
ethz.availability
Open access
en_US
ethz.rosetta.installDate
2018-02-15T10:08:19Z
ethz.rosetta.lastUpdated
2019-02-02T14:38:29Z
ethz.rosetta.exportRequired
true
ethz.rosetta.versionExported
true
ethz.COinS
ctx_ver=Z39.88-2004&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.atitle=Single-cell%20genomics%20of%20multiple%20uncultured%20stramenopiles%20reveals%20underestimated%20functional%20diversity%20across%20oceans&rft.jtitle=Nature%20Communications&rft.date=2018-01-22&rft.volume=9&rft.spage=310&rft.au=Seeleuthner,%20Yoann&Mondy,%20Samuel&Lombard,%20Vincent&Carradec,%20Quentin&Pelletier,%20Eric&rft.genre=article&
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