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dc.contributor.author
Altenhoff, Adrian Michael
dc.contributor.author
Schneider, Adrian
dc.contributor.author
Gonnet, Gaston H.
dc.contributor.author
Dessimoz, Christophe
dc.date.accessioned
2019-04-02T11:01:42Z
dc.date.available
2017-06-09T06:43:49Z
dc.date.available
2019-04-02T10:18:57Z
dc.date.available
2019-04-02T11:01:42Z
dc.date.issued
2011-01-01
dc.identifier.issn
1362-4962
dc.identifier.issn
0305-1048
dc.identifier.issn
1362-4954
dc.identifier.other
10.1093/nar/gkq1238
en_US
dc.identifier.uri
http://hdl.handle.net/20.500.11850/25269
dc.identifier.doi
10.3929/ethz-b-000025269
dc.description.abstract
OMA (Orthologous MAtrix) is a database that identifies orthologs among publicly available, complete genomes. Initiated in 2004, the project is at its 11th release. It now includes 1000 genomes, making it one of the largest resources of its kind. Here, we describe recent developments in terms of species covered; the algorithmic pipeline—in particular regarding the treatment of alternative splicing, and new features of the web (OMA Browser) and programming interface (SOAP API). In the second part, we review the various representations provided by OMA and their typical applications. The database is publicly accessible at http://omabrowser.org .
en_US
dc.format
application/pdf
en_US
dc.language.iso
en
en_US
dc.publisher
Oxford University Press
en_US
dc.rights.uri
http://creativecommons.org/licenses/by-nc/2.5/
dc.title
OMA 2011: orthology inference among 1000 complete genomes
en_US
dc.type
Journal Article
dc.rights.license
Creative Commons Attribution-NonCommercial 2.5 Generic
ethz.journal.title
Nucleic Acids Research
ethz.journal.volume
39
en_US
ethz.journal.issue
Supplement 1
en_US
ethz.journal.abbreviated
Nucleic Acids Res.
ethz.pages.start
D289
en_US
ethz.pages.end
D294
en_US
ethz.version.deposit
publishedVersion
en_US
ethz.identifier.wos
ethz.identifier.nebis
000038633
ethz.publication.place
Oxford
en_US
ethz.publication.status
published
en_US
ethz.leitzahl
03309 - Gonnet, Gaston
en_US
ethz.leitzahl.certified
03309 - Gonnet, Gaston
ethz.date.deposited
2017-06-09T06:44:00Z
ethz.source
ECIT
ethz.identifier.importid
imp59364d357963a91032
ethz.ecitpid
pub:40923
ethz.eth
yes
en_US
ethz.availability
Open access
en_US
ethz.rosetta.installDate
2017-07-26T18:34:02Z
ethz.rosetta.lastUpdated
2019-04-02T11:01:52Z
ethz.rosetta.exportRequired
false
ethz.rosetta.versionExported
true
ethz.COinS
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