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dc.contributor.author
Wüthrich, Daniel
dc.contributor.author
Lang, Daniela
dc.contributor.author
Müller, Nicola F.
dc.contributor.author
Neher, Richard
dc.contributor.author
Stadler, Tanja
dc.contributor.author
Egli, Adrian
dc.date.accessioned
2019-02-12T17:10:18Z
dc.date.available
2019-02-03T04:34:19Z
dc.date.available
2019-02-12T17:10:18Z
dc.date.issued
2019-04
dc.identifier.issn
0166-0934
dc.identifier.other
10.1016/j.jviromet.2019.01.009
en_US
dc.identifier.uri
http://hdl.handle.net/20.500.11850/322766
dc.identifier.doi
10.3929/ethz-b-000322766
dc.description.abstract
We compared two sample preparation protocols for whole genome sequencing of influenza A viruses. Each protocol was assessed using cDNA quantity and quality and the resulting mean genome coverage after sequencing. Both protocols produced acceptable result for samples with high viral load, whereas one protocol performed slightly better with limited virus count.
en_US
dc.format
application/pdf
en_US
dc.language.iso
en
en_US
dc.publisher
Elsevier
en_US
dc.rights.uri
http://creativecommons.org/licenses/by-nc-nd/4.0/
dc.subject
Whole genome sequencing
en_US
dc.subject
Influenza A
en_US
dc.subject
Virus
en_US
dc.subject
Typing
en_US
dc.subject
Method
en_US
dc.title
Evaluation of two workflows for whole genome sequencing-based typing of influenza A viruses
en_US
dc.type
Journal Article
dc.rights.license
Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International
dc.date.published
2019-01-21
ethz.journal.title
Journal of virological methods
ethz.journal.volume
266
en_US
ethz.journal.abbreviated
J. virol. methods
ethz.pages.start
30
en_US
ethz.pages.end
33
en_US
ethz.version.deposit
publishedVersion
en_US
ethz.grant
System analysis of seasonal Influenza - virus transmission and evolution in the City of Basel
en_US
ethz.identifier.wos
ethz.identifier.scopus
ethz.publication.place
Amsterdam
en_US
ethz.publication.status
published
en_US
ethz.leitzahl
ETH Zürich::00002 - ETH Zürich::00012 - Lehre und Forschung::00007 - Departemente::02060 - Dep. Biosysteme / Dep. of Biosystems Science and Eng.::09490 - Stadler, Tanja / Stadler, Tanja
ethz.leitzahl.certified
ETH Zürich::00002 - ETH Zürich::00012 - Lehre und Forschung::00007 - Departemente::02060 - Dep. Biosysteme / Dep. of Biosystems Science and Eng.::09490 - Stadler, Tanja / Stadler, Tanja
ethz.grant.agreementno
166258
ethz.grant.agreementno
166258
ethz.grant.fundername
SNF
ethz.grant.fundername
SNF
ethz.grant.funderDoi
10.13039/501100001711
ethz.grant.funderDoi
10.13039/501100001711
ethz.grant.program
Interdisziplinäres Projekt
ethz.grant.program
Interdisziplinäres Projekt
ethz.date.deposited
2019-02-03T04:34:23Z
ethz.source
SCOPUS
ethz.eth
yes
en_US
ethz.availability
Open access
en_US
ethz.rosetta.installDate
2019-02-12T17:10:51Z
ethz.rosetta.lastUpdated
2022-03-28T22:16:18Z
ethz.rosetta.versionExported
true
ethz.COinS
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