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dc.contributor.author
Sánchez, Pablo
dc.contributor.author
Coutinho, Felipe H.
dc.contributor.author
Sebastián, Marta
dc.contributor.author
Pernice, Massimo C.
dc.contributor.author
Rodríguez-Martínez, Raquel
dc.contributor.author
Salazar Guiral, Guillem
dc.contributor.author
Cornejo-Castillo, Francisco Miguel
dc.contributor.author
Pesant, Stéphane
dc.contributor.author
López-Alforja, Xabier
dc.contributor.author
López-García, Ester María
dc.contributor.author
Agustí, Susana
dc.contributor.author
Gojobori, Takashi
dc.contributor.author
Logares, Ramiro
dc.contributor.author
Montserrat Sala, Maria
dc.contributor.author
Vaqué, Dolors
dc.contributor.author
Massana, Ramon
dc.contributor.author
Duarte, Carlos M.
dc.contributor.author
Acinas, Silvia G.
dc.contributor.author
Gasol, Josep M.
dc.date.accessioned
2024-02-19T13:27:17Z
dc.date.available
2024-02-19T06:49:25Z
dc.date.available
2024-02-19T13:27:17Z
dc.date.issued
2024
dc.identifier.issn
2052-4463
dc.identifier.other
10.1038/s41597-024-02974-1
en_US
dc.identifier.uri
http://hdl.handle.net/20.500.11850/660099
dc.identifier.doi
10.3929/ethz-b-000660099
dc.description.abstract
The Ocean microbiome has a crucial role in Earth's biogeochemical cycles. During the last decade, global cruises such as Tara Oceans and the Malaspina Expedition have expanded our understanding of the diversity and genetic repertoire of marine microbes. Nevertheless, there are still knowledge gaps regarding their diversity patterns throughout depth gradients ranging from the surface to the deep ocean. Here we present a dataset of 76 microbial metagenomes (MProfile) of the picoplankton size fraction (0.2-3.0 mu m) collected in 11 vertical profiles covering contrasting ocean regions sampled during the Malaspina Expedition circumnavigation (7 depths, from surface to 4,000 m deep). The MProfile dataset produced 1.66 Tbp of raw DNA sequences from which we derived: 17.4 million genes clustered at 95% sequence similarity (M-GeneDB-VP), 2,672 metagenome-assembled genomes (MAGs) of Archaea and Bacteria (Malaspina-VP-MAGs), and over 100,000 viral genomic sequences. This dataset will be a valuable resource for exploring the functional and taxonomic connectivity between the photic and bathypelagic tropical and sub-tropical ocean, while increasing our general knowledge of the Ocean microbiome.
en_US
dc.format
application/pdf
en_US
dc.language.iso
en
en_US
dc.publisher
Nature
en_US
dc.rights.uri
http://creativecommons.org/licenses/by/4.0/
dc.subject
Marine biology
en_US
dc.subject
Metagenomics
en_US
dc.subject
Microbial ecology
en_US
dc.title
Marine picoplankton metagenomes and MAGs from eleven vertical profiles obtained by the Malaspina Expedition
en_US
dc.type
Journal Article
dc.rights.license
Creative Commons Attribution 4.0 International
dc.date.published
2024-02-01
ethz.journal.title
Scientific Data
ethz.journal.volume
11
en_US
ethz.journal.issue
1
en_US
ethz.journal.abbreviated
Sci Data
ethz.pages.start
154
en_US
ethz.size
12 p.
en_US
ethz.version.deposit
publishedVersion
en_US
ethz.identifier.wos
ethz.publication.status
published
en_US
ethz.date.deposited
2024-02-19T06:49:34Z
ethz.source
WOS
ethz.eth
yes
en_US
ethz.availability
Open access
en_US
ethz.rosetta.installDate
2024-02-19T13:27:19Z
ethz.rosetta.lastUpdated
2024-02-19T13:27:19Z
ethz.rosetta.exportRequired
true
ethz.rosetta.versionExported
true
ethz.COinS
ctx_ver=Z39.88-2004&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.atitle=Marine%20picoplankton%20metagenomes%20and%20MAGs%20from%20eleven%20vertical%20profiles%20obtained%20by%20the%20Malaspina%20Expedition&rft.jtitle=Scientific%20Data&rft.date=2024&rft.volume=11&rft.issue=1&rft.spage=154&rft.issn=2052-4463&rft.au=S%C3%A1nchez,%20Pablo&Coutinho,%20Felipe%20H.&Sebasti%C3%A1n,%20Marta&Pernice,%20Massimo%20C.&Rodr%C3%ADguez-Mart%C3%ADnez,%20Raquel&rft.genre=article&rft_id=info:doi/10.1038/s41597-024-02974-1&
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