Show simple item record

dc.contributor.author
Zinovik, Igor
dc.contributor.author
Chebiryak, Yury
dc.contributor.author
Kröning, Daniel
dc.date.accessioned
2017-11-17T09:57:32Z
dc.date.available
2017-06-10T18:28:56Z
dc.date.available
2017-11-17T09:57:32Z
dc.date.issued
2009
dc.identifier.uri
http://hdl.handle.net/20.500.11850/68635
dc.identifier.doi
10.3929/ethz-a-005799174
dc.description.abstract
Glass models are frequently used as models for gene regulatory networks. This paper proposes algorithmic methods for the synthesis of Glass networks with specific dynamics, including periodic orbits and equilibrium states. In contrast to existing work, bi-periodic networks and networks possessing both stable equilibria and periodic trajectories are considered. The robustness of the attractor is also addressed, which gives rise to hypercube paths with non-dominated nodes and double coils. These paths correspond to novel combinatorial problems, for which initial experimental results are presented. Finally, a classification of Glass networks with respect to their corresponding gene interaction graphs for the case of graphs with three edges is presented.
en_US
dc.format
application/pdf
dc.language.iso
en
en_US
dc.publisher
ETH, Swiss Federal Institute of Technology Zürich, Computer Systems Institute
en_US
dc.rights.uri
http://rightsstatements.org/page/InC-NC/1.0/
dc.subject
MATHEMATICAL MODELING AND SIMULATION IN GENETICS
en_US
dc.subject
MODELLRECHNUNG UND SIMULATION IN DER GENETIK
en_US
dc.subject
Hypercube
en_US
dc.subject
State transition diagram
en_US
dc.subject
Wiring diagram
en_US
dc.subject
GENE REGULATION, REGULATION OF GENE-EXPRESSION (MOLECULAR BIOLOGY)
en_US
dc.subject
Dominating codes
en_US
dc.subject
Pathway
en_US
dc.subject
LINEARE UND QUASILINEARE PARTIELLE DIFFERENTIALGLEICHUNGEN UND SYSTEME PARTIELLER DIFFERENTIALGLEICHUNGEN (ANALYSIS)
en_US
dc.subject
LINEAR AND QUASILINEAR PARTIAL DIFFERENTIAL EQUATIONS AND SYSTEMS OF PARTIAL DIFFERENTIAL EQUATIONS (MATHEMATICAL ANALYSIS)
en_US
dc.subject
Induced cycle
en_US
dc.subject
GENREGULATION, REGULATION DER GENEXPRESSION (MOLEKULARBIOLOGIE)
en_US
dc.subject
GRAPHENMODELLE (GRAPHENTHEORIE)
en_US
dc.subject
Interaction graph
en_US
dc.subject
GRAPH MODELS (GRAPH THEORY)
en_US
dc.title
Periodic orbits and equilibria in glass models for gene regulatory networks
en_US
dc.type
Report
dc.rights.license
In Copyright - Non-Commercial Use Permitted
ethz.size
14 p.
en_US
ethz.code.ddc
DDC - DDC::0 - Computer science, information & general works::004 - Data processing, computer science
en_US
ethz.code.ddc
DDC - DDC::5 - Science::510 - Mathematics
en_US
ethz.notes
Technical Reports D-INFK.
en_US
ethz.identifier.nebis
005799174
ethz.publication.place
Zürich
en_US
ethz.publication.status
published
en_US
ethz.leitzahl
ETH Zürich::00002 - ETH Zürich::00012 - Lehre und Forschung::00007 - Departemente::02150 - Dep. Informatik / Dep. of Computer Science::02641 - Institut für Computersysteme (ehem.) / Computer Systems Institute (former)
en_US
ethz.date.deposited
2017-06-10T18:30:48Z
ethz.source
ECOL
ethz.source
ECIT
ethz.identifier.importid
imp59366ad32c1b195585
ethz.identifier.importid
imp593650bc31fe453185
ethz.ecolpid
eth:41760
ethz.ecitpid
pub:108978
ethz.eth
yes
en_US
ethz.availability
Open access
en_US
ethz.rosetta.installDate
2017-07-25T17:45:47Z
ethz.rosetta.lastUpdated
2020-02-15T09:23:17Z
ethz.rosetta.versionExported
true
ethz.COinS
ctx_ver=Z39.88-2004&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.atitle=Periodic%20orbits%20and%20equilibria%20in%20glass%20models%20for%20gene%20regulatory%20networks&rft.date=2009&rft.au=Zinovik,%20Igor&Chebiryak,%20Yury&Kr%C3%B6ning,%20Daniel&rft.genre=report&rft.btitle=Periodic%20orbits%20and%20equilibria%20in%20glass%20models%20for%20gene%20regulatory%20networks
 Search via SFX

Files in this item

Thumbnail

Publication type

Show simple item record