Spread of a SARS-CoV-2 variant through Europe in the summer of 2020


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Date

2021-07-29

Publication Type

Journal Article

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yes

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Abstract

Following its emergence in late 2019, the spread of SARS-CoV-21,2 has been tracked by phylogenetic analysis of viral genome sequences in unprecedented detail(3-5). Although the virus spread globally in early 2020 before borders closed, intercontinental travel has since been greatly reduced. However, travel within Europe resumed in the summer of 2020. Here we report on a SARS-CoV-2 variant, 20E (EU1), that was identified in Spain in early summer 2020 and subsequently spread across Europe. We find no evidence that this variant has increased transmissibility, but instead demonstrate how rising incidence in Spain, resumption of travel, and lack of effective screening and containment may explain the variant's success. Despite travel restrictions, we estimate that 20E (EU1) was introduced hundreds of times to European countries by summertime travellers, which is likely to have undermined local efforts to minimize infection with SARS-CoV-2. Our results illustrate how a variant can rapidly become dominant even in the absence of a substantial transmission advantage in favourable epidemiological settings. Genomic surveillance is critical for understanding how travel can affect transmission of SARS-CoV-2, and thus for informing future containment strategies as travel resumes.

Publication status

published

Editor

Book title

Journal / series

Volume

595 (7869)

Pages / Article No.

707 - 712

Publisher

Nature

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Edition / version

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Date collected

Date created

Subject

Phylogenetics; Sars-Cov-2; Viral infection

Organisational unit

09490 - Stadler, Tanja / Stadler, Tanja check_circle

Notes

Funding

196267 - Real-time monitoring of COVID-19 transmission through phylodynamics (SNF)

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