A mass spectrometry-based hybrid method for structural modeling of protein complexes


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Date

2014-04

Publication Type

Journal Article

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yes

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Abstract

We describe a method that integrates data derived from different mass spectrometry (MS)-based techniques with a modeling strategy for structural characterization of protein assemblies. We encoded structural data derived from native MS, bottom-up proteomics, ion mobility–MS and chemical cross-linking MS into modeling restraints to compute the most likely structure of a protein assembly. We used the method to generate near-native models for three known structures and characterized an assembly intermediate of the proteasomal base.

Publication status

published

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Volume

11 (4)

Pages / Article No.

403 - 406

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Nature

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Software

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03663 - Aebersold, Rudolf (emeritus) / Aebersold, Rudolf (emeritus) check_circle

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