Mycorrhiza

Journal: Mycorrhiza

Abbreviation

Mycorrhiza (Berl.)

Publisher

Springer

ISSN

0940-6360
1432-1890

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Publications 1 - 10 of 12

Distribution of dominant arbuscular mycorrhizal fungi among five plant species in undisturbed vegetation of a coastal grassland
Stukenbrock, Eva H.; Rosendahl, Søren (2005)
Mycorrhiza
Symbiont identity matters
Lendenmann, Mark; Thonar, Cécile; Barnard, Romain L.; et al. (2011)
Mycorrhiza
Identification of heavy metal-induced genes encoding glutathione S-transferases in the arbuscular mycorrhizal fungus Glomus intraradices
Waschke, A.; Sieh, D.; Tamasloukht, M.; et al. (2006)
Mycorrhiza
Optimized assay and storage conditions for enzyme activity profiling of ectomycorrhizae
Pritsch, Karin; Courty, Pierre E.; Churin, Jean-Louis; et al. (2011)
Mycorrhiza
Glomus intraradices dominates arbuscular mycorrhizal communities in a heavy textured agricultural soil
Mathimaran, N.; Ruh, R.; Vullioud, P.; et al. (2005)
Mycorrhiza
Belowground ectomycorrhizal communities in three Norway spruce stands with different degrees of decline in the Czech Republic
Peter, Martina; Ayer, Francois; Cudlin, Pavel; et al. (2008)
Mycorrhiza
New evidence for the symbiosis between Tuber aestivum and Picea abies
Stobbe, U.; Stobbe, A.; Sproll, L.; et al. (2013)
Mycorrhiza
Taxon-specific PCR primers to detect two inconspicuous arbuscular mycorrhizal fungi from temperate agricultural grassland
Gamper, Hannes; Leuchtmann, Adrian (2007)
Mycorrhiza
The ectomycorrhizal morphotype Pinirhiza sclerotia is formed by Acephala macrosclerotiorum sp nov., a close relative of Phialocephala fortinii
Münzenberger, Babette; Bubner, Ben; Wöllecke, Jens; et al. (2009)
Mycorrhiza
An updated LSU database and pipeline for environmental DNA identification of arbuscular mycorrhizal fungi
Delavaux, Camille; Ramos, Robert J.; Sturmer, Sidney L.; et al. (2024)
Mycorrhiza
Recent work established a backbone reference tree and phylogenetic placement pipeline for identification of arbuscular mycorrhizal fungal (AMF) large subunit (LSU) rDNA environmental sequences. Our previously published pipeline allowed any environmental sequence to be identified as putative AMF or within one of the major families. Despite this contribution, difficulties in implementation of the pipeline remain. Here, we present an updated database and pipeline with (1) an expanded backbone tree to include four newly described genera and (2) several changes to improve ease and consistency of implementation. In particular, packages required for the pipeline are now installed as a single folder (conda environment) and the pipeline has been tested across three university computing clusters. This updated backbone tree and pipeline will enable broadened adoption by the community, advancing our understanding of these ubiquitous and ecologically important fungi.

Publications 1 - 10 of 12

Journal: Mycorrhiza

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