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Complex birth-death models for Bayesian phylodynamic inferences
(2018)Phylogenetic trees show the evolutionary relationships between individuals, populations or species and are generally built from genetic sequences. Phylodynamic inference focuses on reconstructing the underlying evolutionary processes from a phylogenetic tree, and can infer biologically meaningful parameters such as the rate of transmission of a pathogen or the rate of extinction of certain species. Its applications thus range from tracking ...Doctoral Thesis