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Date
2023Type
- Conference Paper
ETH Bibliography
yes
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Abstract
High-throughput sequencing (HTS) technologies have revolutionized the field of genomics, enabling rapid and cost-effective genome analysis for various applications. However, the increasing volume of genomic data generated by HTS technologies presents significant challenges for computational techniques to effectively analyze genomes. To address these challenges, several algorithm-architecture co-design works have been proposed, targeting different steps of the genome analysis pipeline. These works explore emerging technologies to provide fast, accurate, and low-power genome analysis.This paper provides a brief review of the recent advancements in accelerating genome analysis, covering the opportunities and challenges associated with the acceleration of the key steps of the genome analysis pipeline. Our analysis highlights the importance of integrating multiple steps of genome analysis using suitable architectures to unlock significant performance improvements and reduce data movement and energy consumption. We conclude by emphasizing the need for novel strategies and techniques to address the growing demands of genomic data generation and analysis. Show more
Publication status
publishedExternal links
Book title
2023 60th ACM/IEEE Design Automation Conference (DAC)Pages / Article No.
Publisher
IEEEEvent
Organisational unit
09483 - Mutlu, Onur / Mutlu, Onur
Notes
Invited.More
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ETH Bibliography
yes
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