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Inferring causal gene targets from time course expression data
(2016)IFAC-PapersOnLine ~ 6th IFAC Conference on Foundations of Systems Biology in Engineering, FOSBE 2016. ProceedingsIn this work, we proposed a network analysis method called DeltaNeTS for inferring genetic perturbations from temporal transcriptional expression profiles. While several efficacious and robust network analysis methods exist for steady state data, a direct application of these methods to analyze time series expression data often leads to a poor prediction performance. DeltaNeTS is an extension of our previous method DeltaNet, which involves ...Conference Paper -
Gene regulatory network inference using time-stamped cross-sectional single cell expression data
(2016)IFAC-PapersOnLine ~ 6th IFAC Conference on Foundations of Systems Biology in Engineering, FOSBE 2016. ProceedingsIn this paper we presented a novel method for inferring gene regulatory network (GRN) from time-stamped cross-sectional single cell data. Our strategy, called SNIFS (Sparse Network Inference For Single cell data) seeks to recover the causal relationships among genes by analyzing the evolution of the distribution of gene expression levels over time, more specifically using Kolmogorov-Smirnov (KS) distance. In the proposed method, we ...Conference Paper -
Uncertainty analysis of an interfacial area reconstruction algorithm and its application to two group interfacial area transport equation validation
(2016)Nuclear Engineering and DesignWire mesh sensors (WMS) are state of the art devices that allow high resolution (in space and time) measurement of 2D void fraction distribution over a wide range of two-phase flow regimes, from bubbly to annular. Data using WMS have been recorded at the Helmholtz-Zentrum Dresden-Rossendorf (HZDR) (Lucas et al., 2010; Beyer et al., 2008; Prasser et al., 2003) for a wide combination of superficial gas and liquid velocities, providing an ...Conference Paper -
Neural Document Embeddings for Intensive Care Patient Mortality Prediction
(2016)arXivConference Paper -
Velocity Measurements and Turbulent Dispersion in Annular Liquid Film Flows in BWR Subchannels with Spacers
(2016)Nuclear TechnologyConference Paper -
Muonic atoms and the nuclear structure
(2016)Laser Spectroscopy: Proceedings of the XXII International ConferenceConference Paper -
Plasmonic phased array feeder enabling symbol-by-symbol mm-wave beam steering at 60 GHz
(2016)2016 IEEE International Topical Meeting on Microwave Photonics (MWP)Conference Paper -
Virtual tryout planning in automotive industry based on simulation metamodels
(2016)IOP Conference Series: Materials Science and EngineeringConference Paper -
Inline feedback control for deep drawing applications
(2016)IOP Conference Series: Materials Science and EngineeringConference Paper -
Finding Hamilton Cycles in Random Graphs With Few Queries
(2016)Random Structures & AlgorithmsConference Paper